SARS-CoV-2 Infections in a Triad of Primary School Learners (Grades 1-7), Their Parents, and Teachers in KwaZulu-Natal, South Africa: Protocol for a Cross-Sectional and Nested Case-Cohort Study.

Journal: JMIR research protocols

Volume: 13

Issue: 

Year of Publication: 2024

Affiliated Institutions:  HIV and Other Infectious Diseases Research Unit, South African Medical Research Council, Cape Town, South Africa. Center for Rural Health, School of Nursing and Public Health, University of KwaZulu-Natal, Durban, South Africa. Biostatistics Research Unit, South African Medical Research Council, Durban, South Africa. Centre for the AIDS Programme of Research in South Africa, Durban, South Africa. Wellcome Centre for Infectious Diseases Research in Africa, University of Cape Town, Cape Town, South Africa. Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa. Discipline of Virology, School of Laboratory Medicine and Medical Sciences, University of KwaZulu Natal, Durban, South Africa.

Abstract summary 

In low- and middle-income countries (LMICs) such as South Africa, there is paucity of data on SARS-CoV-2 infections among children attending school, including seroprevalence and transmission dynamics.This pilot study aims to assess (1) the prevalence of self-reported or confirmed SARS-CoV-2 prior infections, COVID-19 symptoms (including long COVID), seroprevalence of SARS-CoV-2 antibodies, and general/mental health, (2) longitudinal changes in SARS-CoV-2 seroprevalence, and (3) SARS-CoV-2 acute infections, immune responses, transmission dynamics, and symptomatic versus asymptomatic contacts in a unique cohort of unvaccinated primary school learners, their parents, teachers, and close contacts in semirural primary school settings.Learners (grades 1-7) from primary schools in KwaZulu-Natal, South Africa, their parents, and teachers will be invited to enroll into the COVID kids school study (CoKiDSS). CoKiDSS comprises 3 parts: a cross-sectional survey (N=640), a follow-up survey (n=300), and a nested case-cohort substudy. Finger-prick blood and saliva samples will be collected for serological and future testing, respectively, in the cross-sectional (451 learners:147 parents:42 teachers) and follow-up (210 learners:70 parents:20 teachers) surveys. The nested case-cohort substudy will include cases from the cross-sectional survey with confirmed current SARS-CoV-2 infection (n=30) and their close contacts (n=up to 10 per infected participant). Finger-prick blood (from all substudy participants), venous blood (from cases), and nasal swabs (from cases and contacts) will be collected for serological testing, immunological testing, and viral genome sequencing, respectively. Questionnaires covering sociodemographic and general and mental health information, prior and current SARS-CoV-2 symptoms and testing information, vaccination status, preventative behavior, and lifestyle will be administered. Statistical methods will include generalized linear mixed models, intracluster correlation, descriptive analysis, and graphical techniques.A total of 645 participants were enrolled into the cross-sectional survey between May and August 2023. A subset of 300 participants were followed up in the follow-up survey in October 2023. Screening of the participants into the nested case-cohort substudy is planned between November 2023 and September 2024. Data cleanup and analysis for the cross-sectional survey is complete, while those for the follow-up survey and nested case substudy will be completed by the third quarter of 2024. The dissemination and publication of results is anticipated for the fourth quarter of 2024.This study provides data from an LMIC setting on the impact of SARS-CoV-2 on school-attending learners, their parents, and teachers 3 years after the SARS-CoV-2 pandemic was declared and 21-24 months after resumption of normal school attendance. In particular, this study will provide data on the prevalence of self-reported or confirmed SARS-CoV-2 prior infection, prior and current symptoms, seroprevalence, changes in seroprevalence, SARS-CoV-2 transmission, SARS-CoV-2 adaptive immune responses, and symptoms of long COVID and mental health among a triad of learners, their parents, and teachers.DERR1-10.2196/52713.

Authors & Co-authors:  Dassaye Reshmi R Chetty Terusha T Daniels Brodie B Gaffoor Zakir Z Spooner Elizabeth E Ramraj Trisha T Mthethwa Ncengani N Nsibande Duduzile Faith DF Pillay Saresha S Bhana Arvin A Magasana Vuyolwethu V Reddy Tarylee T Mohlabi Khanya K Moore Penelope Linda PL Burgers Wendy A WA de Oliveira Tulio T Msomi Nokukhanya N Goga Ameena A

Study Outcome 

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Statistics
Citations : 
Authors :  18
Identifiers
Doi : 10.2196/52713
SSN : 1929-0748
Study Population
Male,Female
Mesh Terms
Humans
Other Terms
COVID-19;SARS-CoV-2;learners;long COVID;seroprevalence;transmission dynamics
Study Design
Cross Sectional Study,Cohort Study,Case Study,Descriptive Study,Longitudinal Study
Study Approach
Mixed Methods
Country of Study
South Africa
Publication Country
Canada