A novel missense variant in the ATPase domain of ATP8A2 and review of phenotypic variability of -related disorders caused by missense changes.

Journal: medRxiv : the preprint server for health sciences

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Affiliated Institutions:  Department of Neuroscience & Cell Biology, Rutgers-Robert Wood Johnson Medical School, New Brunswick, NJ . Department of Biochemistry & Molecular Biology, University of British Columbia, Vancouver, B.C., Canada. Faculty of Medicine, University of Khartoum, Khartoum, Sudan. Institute of Endemic Diseases, University of Khartoum, Khartoum, Sudan. Sudanese Neurogenetics Research group, Faculty of Medicine, University of Khartoum, Khartoum, Sudan. Department of Basic Sciences, College of Medicine, Princess Nourah bint Abdulrahman University, Riyadh, P.O.Box , Riyadh , Saudi Arabia. Department of Pediatrics and Neurology, Rutgers - Robert Wood Johnson Medical School, New Brunswick, NJ, USA. Consultant Pediatric Neurologist, Health Sector, King Abdulaziz City for Science and Technology, Riyadh , Saudi Arabia. Department of Biochemistry, Faculty of Medicine, University of Khartoum, Khartoum, Sudan.

Abstract summary 

ATPase, class 1, type 8A, member 2 (ATP8A2) is a P4-ATPase with a critical role in phospholipid translocation across the plasma membrane. Pathogenic variants in are known to cause cerebellar ataxia, mental retardation, and disequilibrium syndrome 4 (CAMRQ4) which is often associated with encephalopathy, global developmental delay, and severe motor deficits. Here, we present a family with two siblings presenting with global developmental delay, intellectual disability, spasticity, ataxia, nystagmus, and thin corpus callosum. Whole exome sequencing revealed a homozygous missense variant in the nucleotide binding domain of ATP8A2 (p.Leu538Pro) that results in near complete loss of protein expression. This is in line with other missense variants in the same domain leading to protein misfolding and loss of ATPase function. In addition, by performing diffusion-weighted imaging, we identified bilateral hyperintensities in the posterior limbs of the internal capsule suggesting possible microstructural changes in axon tracts that had not been appreciated before and could contribute to the sensorimotor deficits in these individuals.

Authors & Co-authors:  Flannery Kyle P KP Safwat Sylvia S Matsell Eli E Battula Namarata N Hamed Ahlam A A AAA Mohamed Inaam N IN Elseed Maha A MA Koko Mahmoud M Abubaker Rayan R Abozar Fatima F Elsayed Liena E O LEO Bhise Vikram V Molday Robert S RS Salih Mustafa A MA Yahia Ashraf A Manzini M Chiara MC

Study Outcome 

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Citations :  Adzhubei I., Jordan D. M., & Sunyaev S. R. (2013). Predicting functional effect of human missense mutations using PolyPhen-2. Curr Protoc Hum Genet, Chapter 7, Unit7.20. 10.1002/0471142905.hg0720s76
Authors :  16
Identifiers
Doi : 2024.05.15.24306843
SSN : 
Study Population
Male,Female
Mesh Terms
Other Terms
ATP8A2;ATPase (Min.5-Max. 8);CAMRQ4;neurodevelopmental disorder;rare variants
Study Design
Study Approach
Country of Study
Publication Country
United States