Host and Microbiome Genome-Wide Association Studies: Current State and Challenges.

Journal: Frontiers in genetics

Volume: 9

Issue: 

Year of Publication: 

Affiliated Institutions:  Division of Human Genetics, Department of Pathology, Institute of Infectious Disease and Molecular Medicine, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa. Computational Biology Division, Department of Integrative Biomedical Sciences, Institute of Infectious Disease and Molecular Medicine, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa. Department of Psychiatry and Mental Health, University of Cape Town, Cape Town, South Africa. Department of Psychiatry, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa. Department of Animal Science, University of Minnesota-Twin Cities, St. Paul, MN, United States.

Abstract summary 

The involvement of the microbiome in health and disease is well established. Microbiome genome-wide association studies (mGWAS) are used to elucidate the interaction of host genetic variation with the microbiome. The emergence of this relatively new field has been facilitated by the advent of next generation sequencing technologies that enable the investigation of the complex interaction between host genetics and microbial communities. In this paper, we review recent studies investigating host-microbiome interactions using mGWAS. Additionally, we highlight the marked disparity in the sampling population of mGWAS carried out to date and draw attention to the critical need for inclusion of diverse populations.

Authors & Co-authors:  Awany Denis D Allali Imane I Dalvie Shareefa S Hemmings Sian S Mwaikono Kilaza S KS Thomford Nicholas E NE Gomez Andres A Mulder Nicola N Chimusa Emile R ER

Study Outcome 

Source Link: Visit source

Statistics
Citations :  1000 Genomes Project Consortium Auton, Brooks A., Durbin L. D., Garrison R. M., Kang E. P. H. M., et al. (2015). A global reference for human genetic variation. Nature 526 68–74. 10.1038/nature15393
Authors :  9
Identifiers
Doi : 637
SSN : 1664-8021
Study Population
Male,Female
Mesh Terms
Other Terms
genome-wide association study;host-genetic;host–microbiome interaction;microbiome;microbiome-GWAS
Study Design
Cross Sectional Study
Study Approach
Country of Study
Publication Country
Switzerland