DNA methylation and general psychopathology in childhood: an epigenome-wide meta-analysis from the PACE consortium.

Journal: Molecular psychiatry

Volume: 28

Issue: 3

Year of Publication: 2023

Affiliated Institutions:  Department of Child and Adolescent Psychiatry/ Psychology, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands. ISGlobal, Barcelona Institute for Global Health, Barcelona, Spain. marta.cosin@isglobal.org. School of Psychological Science, MRC Integrative Epidemiology Unit, University of Bristol, Bristol, UK. Department of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, GA, USA. Department of Psychology & Logopedics, University of Helsinki, Helsinki, Finland. VIB Center for Molecular Neurology, Antwerp, Belgium. The Generation R Study Group, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands. ISGlobal, Barcelona Institute for Global Health, Barcelona, Spain. Division of Climate and Environmental Health, Norwegian Institute of Public Health (NIPH), Oslo, Norway. Department of Environmental Science, Vytautas Magnus University, , Kaunas, Lithuania. Bradford Institute for Health Research, Bradford Teaching Hospitals NHS Foundation Trust, Bradford, UK. Department of Social Medicine, University of Crete, Crete, Greece. Department of Paediatrics and Child Health, Red Cross War Memorial Children's Hospital, University of Cape Town, Cape Town, South Africa. Department of Psychiatry and Mental Health, University of Cape Town, Cape Town, South Africa. Medical Research Council Integrative Epidemiology Unit, Population Health Science, Bristol Medical School, University of Bristol, Bristol, UK. Department of Child and Adolescent Psychiatry/ Psychology, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands. c.cecil@erasmusmc.nl.

Abstract summary 

The general psychopathology factor (GPF) has been proposed as a way to capture variance shared between psychiatric symptoms. Despite a growing body of evidence showing both genetic and environmental influences on GPF, the biological mechanisms underlying these influences remain unclear. In the current study, we conducted epigenome-wide meta-analyses to identify both probe- and region-level associations of DNA methylation (DNAm) with school-age general psychopathology in six cohorts from the Pregnancy And Childhood Epigenetics (PACE) Consortium. DNAm was examined both at birth (cord blood; prospective analysis) and during school-age (peripheral whole blood; cross-sectional analysis) in total samples of N = 2178 and N = 2190, respectively. At school-age, we identified one probe (cg11945228) located in the Bromodomain-containing protein 2 gene (BRD2) that negatively associated with GPF (p = 8.58 × 10). We also identified a significant differentially methylated region (DMR) at school-age (p = 1.63 × 10), implicating the SHC Adaptor Protein 4 (SHC4) gene and the EP300-interacting inhibitor of differentiation 1 (EID1) gene that have been previously implicated in multiple types of psychiatric disorders in adulthood, including obsessive compulsive disorder, schizophrenia, and major depressive disorder. In contrast, no prospective associations were identified with DNAm at birth. Taken together, results of this study revealed some evidence of an association between DNAm at school-age and GPF. Future research with larger samples is needed to further assess DNAm variation associated with GPF.

Authors & Co-authors:  Rijlaarsdam Jolien J Cosin-Tomas Marta M Schellhas Laura L Abrishamcar Sarina S Malmberg Anni A Neumann Alexander A Felix Janine F JF Sunyer Jordi J Gutzkow Kristine B KB Grazuleviciene Regina R Wright John J Kampouri Mariza M Zar Heather J HJ Stein Dan J DJ Heinonen Kati K Räikkönen Katri K Lahti Jari J Hüls Anke A Caramaschi Doretta D Alemany Silvia S Cecil Charlotte A M CAM

Study Outcome 

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Statistics
Citations :  Angold A, Costello EJ, Erkanli A. Comorbidity. J Child Psychol Psychiatry. 1999;40:57–87.
Authors :  21
Identifiers
Doi : 10.1038/s41380-022-01871-6
SSN : 1476-5578
Study Population
Male,Female
Mesh Terms
Pregnancy
Other Terms
Study Design
Cross Sectional Study
Study Approach
Country of Study
Publication Country
England