Demographics of sources of HIV-1 transmission in Zambia: a molecular epidemiology analysis in the HPTN 071 PopART study.

Journal: The Lancet. Microbe

Volume: 5

Issue: 1

Year of Publication: 2024

Affiliated Institutions:  Pandemic Sciences Institute and Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK. Pandemic Sciences Institute and Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK; Sydney Infectious Diseases Institute, School of Medical Sciences, Faculty of Medicine and Health, University of Sydney, Sydney, NSW, Australia. Pandemic Sciences Institute and Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK; Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK. Zambart, University of Zambia, Lusaka, Zambia. Zambart, University of Zambia, Lusaka, Zambia; Department of Clinical Research, London School of Hygiene & Tropical Medicine, London, UK. Department of Mathematics, Imperial College London, London, UK. Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA. Division of AIDS, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Rockville, MD, USA. Department of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA. Fred Hutchinson Cancer Research Center, Seattle, WA, USA. Department of Infectious Disease Epidemiology, Imperial College London, London, UK. Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, UK. Pandemic Sciences Institute and Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK. Electronic address: christophe.fraser@bdi.ox.ac.uk.

Abstract summary 

In the last decade, universally available antiretroviral therapy (ART) has led to greatly improved health and survival of people living with HIV in sub-Saharan Africa, but new infections continue to appear. The design of effective prevention strategies requires the demographic characterisation of individuals acting as sources of infection, which is the aim of this study.Between 2014 and 2018, the HPTN 071 PopART study was conducted to quantify the public health benefits of ART. Viral samples from 7124 study participants in Zambia were deep-sequenced as part of HPTN 071-02 PopART Phylogenetics, an ancillary study. We used these sequences to identify likely transmission pairs. After demographic weighting of the recipients in these pairs to match the overall HIV-positive population, we analysed the demographic characteristics of the sources to better understand transmission in the general population.We identified a total of 300 likely transmission pairs. 178 (59·4%) were male to female, with 130 (95% CI 110-150; 43·3%) from males aged 25-40 years. Overall, men transmitted 2·09-fold (2·06-2·29) more infections per capita than women, a ratio peaking at 5·87 (2·78-15·8) in the 35-39 years source age group. 40 (26-57; 13·2%) transmissions linked individuals from different communities in the trial. Of 288 sources with recorded information on drug resistance mutations, 52 (38-69; 18·1%) carried viruses resistant to first-line ART.HIV-1 transmission in the HPTN 071 study communities comes from a wide range of age and sex groups, and there is no outsized contribution to new infections from importation or drug resistance mutations. Men aged 25-39 years, underserved by current treatment and prevention services, should be prioritised for HIV testing and ART.National Institute of Allergy and Infectious Diseases, US President's Emergency Plan for AIDS Relief, International Initiative for Impact Evaluation, Bill & Melinda Gates Foundation, National Institute on Drug Abuse, and National Institute of Mental Health.

Authors & Co-authors:  Hall Matthew M Golubchik Tanya T Bonsall David D Abeler-Dörner Lucie L Limbada Mohammed M Kosloff Barry B Schaap Ab A de Cesare Mariateresa M MacIntyre-Cockett George G Otecko Newton N Probert William W Ratmann Oliver O Bulas Cruz Ana A Piwowar-Manning Estelle E Burns David N DN Cohen Myron S MS Donnell Deborah J DJ Eshleman Susan H SH Simwinga Musonda M Fidler Sarah S Hayes Richard R Ayles Helen H Fraser Christophe C

Study Outcome 

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Statistics
Citations :  Cohen MS, Chen YQ, McCauley M, et al. Prevention of HIV-1 infection with early antiretroviral therapy. N Engl J Med. 2011;365:493–505.
Authors :  25
Identifiers
Doi : 10.1016/S2666-5247(23)00220-3
SSN : 2666-5247
Study Population
Men,Male,Males
Mesh Terms
Adult
Other Terms
Study Design
Study Approach
Country of Study
Zambia
Publication Country
England