Rare structural genetic variation in human prion diseases.

Journal: Neurobiology of aging

Volume: 36

Issue: 5

Year of Publication: 2016

Affiliated Institutions:  MRC Prion Unit and Department of Neurodegenerative Disease, UCL Institute of Neurology, London, UK. Department of Neurology, Georg-August University Göttingen, Göttingen, Germany; German Center for Neurodegenrative Diseases (DZNE), Gottingen, Germany. MRC Prion Unit and Department of Neurodegenerative Disease, UCL Institute of Neurology, London, UK. Electronic address: s.mead@prion.ucl.ac.uk.

Abstract summary 

Prion diseases are a diverse group of neurodegenerative conditions, caused by the templated misfolding of prion protein. Aside from the strong genetic risk conferred by multiple variants of the prion protein gene (PRNP), several other variants have been suggested to confer risk in the most common type, sporadic Creutzfeldt-Jakob disease (sCJD) or in the acquired prion diseases. Large and rare copy number variants (CNVs) are known to confer risk in several related disorders including Alzheimer's disease (at APP), schizophrenia, epilepsy, mental retardation, and autism. Here, we report the first genome-wide analysis for CNV-associated risk using data derived from a recent international collaborative association study in sCJD (n = 1147 after quality control) and publicly available controls (n = 5427). We also investigated UK patients with variant Creutzfeldt-Jakob disease (n = 114) and elderly women from the Eastern Highlands of Papua New Guinea who proved highly resistant to the epidemic prion disease kuru, who were compared with healthy young Fore population controls (n = 395). There were no statistically significant alterations in the burden of CNVs >100, >500, or >1000 kb, duplications, or deletions in any disease group or geographic region. After correction for multiple testing, no statistically significant associations were found. A UK blood service control sample showed a duplication CNV that overlapped PRNP, but these were not found in prion disease. Heterozygous deletions of a 3' region of the PARK2 gene were found in 3 sCJD patients and no controls (p = 0.001, uncorrected). A cell-based prion infection assay did not provide supportive evidence for a role for PARK2 in prion disease susceptibility. These data are consistent with a modest impact of CNVs on risk of late-onset neurologic conditions and suggest that, unlike APP, PRNP duplication is not a causal high-risk mutation.

Authors & Co-authors:  Lukic Ana A Uphill James J Brown Craig A CA Beck John J Poulter Mark M Campbell Tracy T Adamson Gary G Hummerich Holger H Whitfield Jerome J Ponto Claudia C Zerr Inga I Lloyd Sarah E SE Collinge John J Mead Simon S

Study Outcome 

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Statistics
Citations : 
Authors :  14
Identifiers
Doi : 10.1016/j.neurobiolaging.2015.01.011
SSN : 1558-1497
Study Population
Women
Mesh Terms
3' Untranslated Regions
Other Terms
CJD;CNV;GWAS;Kuru;Prion
Study Design
Study Approach
Country of Study
Guinea
Publication Country
United States