Identification of novel mammalian viruses in tree shrews ( ).

Journal: Zoological research

Volume: 45

Issue: 2

Year of Publication: 2024

Affiliated Institutions:  School of Clinical and Basic Medical Sciences, Shandong First Medical University & Shandong Academy of Medical Sciences, Ji'nan, Shandong , China. Key Laboratory of Animal Models and Human Disease Mechanisms of the Chinese Academy of Sciences/Key Laboratory of Bioactive Peptides of Yunnan Province, KIZ-CUHK Joint Laboratory of Bioresources and Molecular Research in Common Diseases, Center for Biosafety Mega-Science, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan , China. School of Public Health, Shandong First Medical University & Shandong Academy of Medical Sciences, Ji'nan, Shandong , China. National Resource Center for Non-Human Primates, Kunming Primate Research Center, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan , China. Sydney Institute for Infectious Diseases, School of Medical Sciences, The University of Sydney, Sydney, New South Wales , Australia. Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai , China.

Abstract summary 

The Chinese tree shrew ( ), a member of the mammalian order Scandentia, exhibits considerable similarities with primates, including humans, in aspects of its nervous, immune, and metabolic systems. These similarities have established the tree shrew as a promising experimental model for biomedical research on cancer, infectious diseases, metabolic disorders, and mental health conditions. Herein, we used meta-transcriptomic sequencing to analyze plasma, as well as oral and anal swab samples, from 105 healthy asymptomatic tree shrews to identify the presence of potential zoonotic viruses. In total, eight mammalian viruses with complete genomes were identified, belonging to six viral families, including , , , , , and . Notably, the presence of rotavirus was recorded in tree shrews for the first time. Three viruses - hepacivirus 1, parvovirus, and picornavirus - exhibited low genetic similarity (<70%) with previously reported viruses at the whole-genome scale, indicating novelty. Conversely, three other viruses - hepacivirus 2, hepatovirus A and hepevirus - exhibited high similarity (>94%) to known viral strains. Phylogenetic analyses also revealed that the rotavirus and mammalian orthoreovirus identified in this study may be novel reassortants. These findings provide insights into the diverse viral spectrum present in captive Chinese tree shrews, highlighting the necessity for further research into their potential for cross-species transmission.

Authors & Co-authors:  Zhou Tian Wang Yang Wang Zhao Zhang Ma Lv Holmes Zheng Shi

Study Outcome 

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Statistics
Citations :  Amako Y, Tsukiyama-Kohara K, Katsume A, et al. 2010. Pathogenesis of hepatitis C virus infection in Tupaia belangeri. Journal of Virology, 84(1): 303–311.
Authors :  12
Identifiers
Doi : 10.24272/j.issn.2095-8137.2023.306
SSN : 2095-8137
Study Population
Male,Female
Mesh Terms
Humans
Other Terms
Genomic analysis;Mammalian viruses;Meta-transcriptomic sequencing;Tree shrew (Tupaia belangeri chinensis)
Study Design
Study Approach
Country of Study
Mali
Publication Country
China