Machine learning in small sample neuroimaging studies: Novel measures for schizophrenia analysis.

Journal: Human brain mapping

Volume: 45

Issue: 5

Year of Publication: 2024

Affiliated Institutions:  Department of Signal Theory, Telematics and Communications, Andalusian Research Institute in Data Science and Computational Intelligence (DaSCI), University of Granada, Granada, Spain. Key Laboratory of Psychotic Disorders, Shanghai Mental Health Center, Shanghai Jiao Tong University School of Medicine, Shanghai, China. Key Laboratory of Brain Functional Genomics (MOE & STCSM), School of Psychology and Cognitive Science, East China Normal University, Shanghai, China. Neuropsychology and Applied Cognitive Neuroscience Laboratory, CAS Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences, Beijing, China. Department of Psychiatry, University of Cambridge, Cambridge, UK.

Abstract summary 

Novel features derived from imaging and artificial intelligence systems are commonly coupled to construct computer-aided diagnosis (CAD) systems that are intended as clinical support tools or for investigation of complex biological patterns. This study used sulcal patterns from structural images of the brain as the basis for classifying patients with schizophrenia from unaffected controls. Statistical, machine learning and deep learning techniques were sequentially applied as a demonstration of how a CAD system might be comprehensively evaluated in the absence of prior empirical work or extant literature to guide development, and the availability of only small sample datasets. Sulcal features of the entire cerebral cortex were derived from 58 schizophrenia patients and 56 healthy controls. No similar CAD systems has been reported that uses sulcal features from the entire cortex. We considered all the stages in a CAD system workflow: preprocessing, feature selection and extraction, and classification. The explainable AI techniques Local Interpretable Model-agnostic Explanations and SHapley Additive exPlanations were applied to detect the relevance of features to classification. At each stage, alternatives were compared in terms of their performance in the context of a small sample. Differentiating sulcal patterns were located in temporal and precentral areas, as well as the collateral fissure. We also verified the benefits of applying dimensionality reduction techniques and validation methods, such as resubstitution with upper bound correction, to optimize performance.

Authors & Co-authors:  Jimenez-Mesa Ramirez Yi Yan Chan Murray Gorriz Suckling

Study Outcome 

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Statistics
Citations :  Andreasen, N. C. , Harris, G. , Cizadlo, T. , Arndt, S. , O'Leary, D. S. , Swayze, V. , & Flaum, M. (1994). Techniques for measuring sulcal/gyral patterns in the brain as visualized through magnetic resonance scanning: BRAINPLOT and BRAINMAP. Proceedings of the National Academy of Sciences, 91(1), 93–97.
Authors :  8
Identifiers
Doi : e26555
SSN : 1097-0193
Study Population
Male,Female
Mesh Terms
Humans
Other Terms
cross‐validation;deep learning;explanaible AI;machine learning;resubstitution with upper bound correction;schizophrenia;sulcal morphology
Study Design
Study Approach
Country of Study
Publication Country
United States